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Discovery of immune related factors in Fenneropenaeus chinensis by annotation of ESTs

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Progress in Natural Science:Materials International 2004年第1期14卷 48-55页

作者： SHEN Yaoqing 1,2 , XIANG Jianhai 1*, WANG Bing 1,2 , LI Fuhua 1 and TONG Wei 3.1. Experimental Marine Biology Laboratory, Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071,China 2. graduate school of the Chinese Academy of Sciences, beijing 10003., China 3. Genomics & Bioinformatics Institute, Chinese Academy of Sciences, beijing 1013.0, China) Chinese Acad Sci Inst Oceanol Expt Marine Biol Lab Qingdao 266071 Peoples R China Chinese Acad Sci Grad Sch Beijing 100039 Peoples R China Chinese Acad Sci Geonom & Bioinformat Inst Beijing 101300 Peoples R China

A total of 10446 expressed sequence tags (ESTs) are obtained by a large scale sequencing of a cDNA library from cephalothorax of adult Fenneropenaeus chinensis . An EST analysis platform was built up based on local computers and bioinformatic techniques were used to annotate these ESTs in order to promptly find possible functional genes, especially for immune related factors. About 4% of the ESTs show similarity to the coding sequences of such factors, including lectin, serine protease, serpin, lysozyme, etc. These ESTs provide a partial profile of the immune system in F. chinensis and useful information for further study on these genes.

关键词： Fenneropenaeus chinensis bioinformatics ESTs immune factors

Variation properties of ionospheric eclipse factor and ionospheric influence factor

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Progress in Natural Science:Materials International 2005年第6期15卷 573-576页

作者： ZHAO Chunmei 1,2 *, YUAN Yunbin1, OU Jikun1 and CHEN Jinping3.1. Institute of Geodesy and Geophysics, Chinese Academy of Sciences, Wuhan 43.077, China 2. graduate school of Chinese Academy of Sciences, beijing 10003., China 3. Department of Precision Instrument and Mechanology, Tsinghua University, beijing 100084, China) Institute of Geodesy and Geophysics Chinese Academy of Sciences Wuhan 430077 China graduate school of Chinese Academy of Sciences Beijing 100039 China Department of Precision Instrument and Mechanology Tsinghua University Beijing 100084 China

The concepts and calculation methods of ionospheric eclipse factor (IEF) and ionospheric influence factor (IFF) are further illustrated. The temporal and spacial variation properties of IEF and IFF are studied, which shows that the properties are influenced by the geographic position and season. The possibility of improving the precision of using GPS data to determine ionospheric delay based on the above variation properties is also analysed.

关键词： GPS ionospheric eclipse factor ionospheric influence factor

A new method of discovering new meteor showers from the IMO single-station video meteor database

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Science China(Physics,Mechanics & Astronomy) 2008年第8期51卷 1170-1178页

作者： LI Jun1,2 & ZHU Jin3.1 No.2 Middle school of beijing,beijing 100010,China 2 school of Journalism and Communication,Tsinghua University,beijing 100084,China 3.beijing Planterium,beijing 10004.,China 1. No.2 Middle school of beijing Beijing 100010 China 2. school of Journalism and Communication Tsinghua University Beijing 100084 China 3. beijing Planterium Beijing 100044 China

It has been found that unknown meteor showers could be efficiently discovered from the single station video meteor database of the International Meteor Organization(IMO) by assuming the geocentric velocity and adjusting it within the dynamically permitted range. The mean geocentric velocities of new meteor showers can be obtained,as well as the coordinates of the radiants. The activity period and maximum time can also be obtained if there are sufficient shower meteors. All single station video meteor observations between February 13.and 17(from 2000 to 2005) in IMO's database are processed with this method. As a result,two new meteor showers,one near RA=245.10°,Dec=41.82° in Hercules and the other near RA=23..03.,Dec=17.04° in Serpenids,are discovered. Some dynamical characteristics of the new meteor showers are also determined. Considering the random nature on the selection of period in this work,it is expected that there are some more potential new meteor showers in IMO's video database.

关键词： single-station video meteor database the process of single-station video meteor database discovery of new meteor showers

A formal model of fair exchange protocols

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Science in China(Series F) 2005年第4期48卷 499-512页

作者： QING Sihan1,2,3.& LI Gaicheng1,2,3.1. Engineering Research Center for Information Security Technology, Institute of Software, Chinese Aca- demy of Sciences, beijing 100080, China 2. beijing Zhongke Ansheng Corporation of Information Technology, beijing 100080, China 3. {3. school of the Chinese Academy of Sciences, beijing 10003., China 1. Engineering Research Center for Information Security Technology Institute of Software Chinese Academy of Sciences 100080 Beijing China 2. beijing Zhongke Ansheng Corporation of Information Technology 100080 Beijing China 3. graduate school of the Chinese Academy of Sciences 100039 Beijing China

Based on the study of existing fair exchange protocols, this paper sets up an accurate formal model by stepwise refinement. In the process of refinement an unreliable channel is employed to simulate an attack behavior. The model provides a novel formal definition of exchanged items, and presents the formal goals for fairness, accountability, etc., reflecting the inherent requirements for fair exchange protocols across-the-board. In order to check, prove, and design fair exchange protocols effectively and efficiently, the model puts forward a novel property of abuse-freeness which applies to all fair exchange protocols, gives a formal definition for trust strand of the third party, and presents general criteria of designing a secure and effective fair exchange protocol. Taking a typical fair exchange protocol as an example, this paper presents the analysis steps of fair exchange protocols appealing to our model. An unknown attack is uncovered. The analysis reveals the process of a complete attack, discovering deeper reasons for causing an attack. Finally, we modify the flawed protocol and the revised protocol ensures the desirable properties.

关键词： events local causal relation local temporal relation global relation exchanged item security goals.

Formal Verification under Unknown Constraints

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Wuhan University Journal of Natural Sciences 2005年第1期10卷 43-46页

作者： LI Guang-hui 1,2,3., LI Xiao-wei 2,3.. school of Information Engineering, Zhejiang Forestry College, Hangzhou 3.13.0, Zhejiang, China 2. Institute of Computing Technology, Chinese Academy of Sciences, beijing 100080, China 3. graduate school of the Chinese Academy of Sciences, beijing 10003., China school of Information Engineering Zhejiang Forestry College Hangzhou 311300 Zhejiang China

We present a formal method of verifying designs with unknown constraints (e.g., black boxes) using Boolean satisfiability (SAT). This method is based on a new encoding scheme of unknown constraints, and solves the corresponding conjunctive normal form (CNF) ***,this method can avoid the potential memory explosion, which the binary decision diagram (BDD) based techniques maybe suffer from, thus it has the capacity of verifying large designs. Experimental results demonstrate the efficiency and feasibility of the proposed method.

关键词： formal verification unknown constraints black box Boolean satisfiability Boolean comparison

Geographical Agglomeration of Chinese Manufacturing Industries

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中国人口·资源与环境：英文版 2007年第2期5卷 3-11页

作者： Zhang Hua 1, 2, Zheng Wei3.1. Institute of Geographical Sciences and Natural Resources Research, Chinese Academy of Sciences, beijing 100101, China 2. graduate school of the Chinese Academy of Sciences, beijing 10003., China 3. school of Geography, beijing Normal University, beijing 100875, China Institute of Geographical Sciences and Natural Resources Research Chinese Academy of Sciences Beijing 100101 China graduate school of the Chinese Academy of Sciences Beijing 100039 China school of Geography Beijing Normal University Beijing 100875 China

Based on the plant level data from the First National Census of Basic Units, the Second National Census of Basic Units, and the First National Economic Census of China, this paper ex- amines the geographical agglomeration of Chinese manufacturing industries at a more disaggregated level both by industrial classi-fication and spatial unit analysis. Applying the agglomeration index proposed by Maurel and Sedillot, studies show that the most agglomerated industries are resource-intensive, and capital and technology intensive while industries demanding localized inputs or serving localized markets or favored by local governments are fairly dispersed. The more disaggregated industries are more spa- tially agglomerated. At the finer spatial scale, industries are more dispersed. Results indicate that within-county spillovers are stronger than nearby-county spillovers, and within-prefecture spillovers are stronger than nearby prefecture spillovers. Local- ized spillovers are still quite substantial at a range beyond that of counties. Comparing the agglomeration index of Chinese manu- facturing industries in 1996, 2001 and 2004, agglomeration seems to be a general tendency. Results also indicate that some industries have experienced remarkable changes in their levels of agglom- eration in the period 1996–2004.

关键词： industrial agglomeration manufacturing industries the MS index

Threshold quantum secure direct communication without entanglement

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Science China(Physics,Mechanics & Astronomy) 2008年第2期51卷 176-183页

作者： YANG YuGuang1,3.& WEN QiaoYan2 1 College of Computer Science and Technology, beijing University of Technology, beijing 100022, China 2 school of Science, beijing University of Posts and Telecommunications, beijing 100876, China 3.State Key Laboratory of Information Security (graduate school of Chinese Academy of Sciences), beijing 10004., China 1. College of Computer Science and Technology Beijing University of Technology Beijing 100022 China 3. State Key Laboratory of Information Security (graduate school of Chinese Academy of Sciences) Beijing 100049 China 2. school of Science Beijing University of Posts and Telecommunications Beijing 100876 China

For the first time, a threshold quantum secure direct communication (TQSDC) scheme is presented. Similar to the classical Shamir's secret sharing scheme, the sender makes n shares, S1, …, Sn of secret key K and each receiver keeps a share secretly. If the sender wants to send a secret message M to the receivers, he en-codes the information of K and M on a single photon sequence and sends it to one of the receivers. According to the secret shares, the t receivers sequentially per-form the corresponding unitary operations on the single photon sequence and ob-tain the secret message M. The shared shares may be reusable if it can be judged that there is no eavesdropper in line. We discuss that our protocol is feasible with current technology.

关键词： quantum secure direct communication threshold secure direct communication quantum secret sharing

A tentative study for the prediction of the CME related geomagnetic storm intensity and its transit time

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Science China(Technological Sciences) 2005年第6期48卷 648-668页

作者： ZHAO Xinhua1,2 & FENG Xueshang1,3.1. SIGMA Weather Group, Key Laboratory of Space Weather, Center for Space Science and Applied Re-search, Chinese Academy of Sciences, beijing 100080, China 2. graduate school of the Chinese Academy of Sciences, beijing 10003., China 3. school of Geophysics and Geoinformation Systems, China University of Geosciences, beijing 100083. China 1. SIGMA Weather Group Key Laboratory of Space Weather Center for Space Science and Applied Research Chinese Academy of Sciences 100080 Beijing China 2. graduate school of the Chinese Academy of Sciences 100039 Beijing China 3. school of Geophysics and Geoinformation Systems China University of Geosciences 100083 Beijing China

Using 80 CME-ICME events during 1997.1―2002.9, based on the eruptive source locations of CMEs and solar magnetic field observation at the photosphere, a current sheet magnetic coordinate (CMC) system is established in order to study the propagation of CME and its geoeffectiveness. In context of this coordinate system, the effect of the eruptive source location and the form of heliospheric current sheet (HCS) at the eruptive time of CME on the geomagnetic storm intensity caused by CME and the CME’s transit time at the Earth is investigated in detail. Our preliminary conclusions are: 1) The geomagnetic disturbances caused by CMEs tend to have the so-called “same side-opposite side effect”, i.e. CMEs erupt from the same side of the HCS as the earth would be more likely to arrive at the earth and the geomagnetic disturbances associated with them tend to be of larger magnitude, while CMEs erupting from the opposite side would arrive at the earth with less probability and the corresponding geomagnetic disturbance magnitudes would be relatively weaker. 2) The angular separation between the earth and the HCS affect the corresponding disturbance intensity. That is, when our earth is located near the HCS, adverse space weather events occur most probably. 3. The erupting location of the CME and its nearby form of HCS will also affect its arrival time at the earth. According to these conclusions, in this context of CMC coordinate we arrive at new prediction method for estimating the geomagnetic storm intensity (Dstmin) caused by CMEs and their transit times. The application of the empirical model for 80 CME-ICME events shows that the relative error of Dst is within 3.% for 59% events with Dstmin≤?50 nT, while the averaged absolute error of transit time is lower than 10 h for all events.

关键词： coronal mass ejections, current sheet magnetic coordinate system, geomagnetic storm intensity, transit time, prediction method.

Effect of rock mass structure and block size on the slope stability——Physical modeling and discrete element simulation

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Science China(Technological Sciences) 2005年第z1期48卷 1-17页

作者： LI Shihai1, LIAN Zhenzhong1,2 & J. G. Wang3.1. Institute of Mechanics, Chinese Academy of Sciences, beijing 100080, China 2. graduate school, Chinese Academy of Sciences, beijing 100060, China 3. Tropical Marine Science Institute, National University of Singapore, Singapore 119260 Chinese Acad Sci Inst Mech Beijing 100080 Peoples R China Chinese Acad Sci Grad Sch Beijing 100060 Peoples R China Natl Univ Singapore Trop Marine Sci Inst Singapore 119260 Singapore

This paper studies the stability of jointed rock slopes by using our improved three-dimensional discrete element methods (DEM) and physical modeling. Results show that the DEM can simulate all failure modes of rock slopes with different joint configurations. The stress in each rock block is not homogeneous and blocks rotate in failure development. Failure modes depend on the configuration of joints. Toppling failure is observed for the slope with straight joints and sliding failure is observed for the slope with staged joints. The DEM results are also compared with those of limit equilibrium method (LEM). Without considering the joints in rock masses, the LEM predicts much higher factor of safety than physical modeling and DEM. The failure mode and factor of safety predicted by the DEM are in good agreement with laboratory tests for any jointed rock slope.

关键词： rock masses, slope stability, DEM simulation, block size effect, joints configuration effect, limit equilibrium method.