Comparison of Viromes in Ticks from Different Domestic Animals in China

作     者：Tingting Zhao Haiyan Gong Xiaojuan Shen Wen Zhang Tongling Shan Xiangqian Yu Seong Jin Wang Li Cui Tingting Zhao;Haiyan Gong;Xiaojuan Shen;Wen Zhang;Tongling Shan;Xiangqian Yu;Seong Jin Wang;Li Cui

作者机构：Shanghai Key Laboratory of Veterinary BiotechnologySchool of Agriculture and BiologyShanghai Jiao Tong UniversityShanghai 200240China Shanghai Veterinary Research InstituteChinese Academy of Agricultural SciencesShanghai 200241China Shanghai Pudong New District Center for Animal Diseases Control and PreventionShanghai 201299China School of MedicineJiangsu UniversityZhenjiang 2012013China 

出 版 物：《Virologica Sinica》 (中国病毒学（英文版）)

年 卷 期：2020年第35卷第4期

页      面：398-406页

核心收录：

学科分类：090601[农学-基础兽医学] 09[农学] 0906[农学-兽医学] 

基　　金：supported by the National Key Research and Development Program of China(2017YFC1200202) the Shanghai Pudong New Area Science and Technology Development Fund(Grant No.PKJ2018-N02) 

主　　题：Ticks Viral metagenomics Virome 

摘      要：Ticks are involved in the transmission of various arboviruses and some tick-borne viruses pose significant threats to the health of humans or *** study aimed to investigate the geographical distribution of tick species and tickassociated viruses in central and eastern *** 573 ticks from domestic animals including dogs,sheep and cattle were collected in *** genera of ticks were identified including Rhipicephalus and *** was performed on Miseq Illumina platform to characterize the tick viromes from the four different sampling *** trimming,13,640 reads were obtained and annotated to 19 virus *** these sequences,above 37.74%of the viral reads were related to the RNA *** comparison study revealed that the tick viral diversity was considerably different in the two identified tick *** viral diversity of *** was significantly different from that of other Rhipicephalus *** the other hand,substantial overlap in viral species was observed between the same *** addition,we found no evidence that the natural host played a major role in shaping virus diversity based on the comparison of their ***,the geographic location seems to significantly influence the viral *** study indicated that the novel negative-sense RNA viruses identified in this study was closely related to Bole tick virus 1 and 3 *** conclusion,the present study provides a baseline for comparing viruses detected in ticks,according to species,natural hosts,and geographic locations.