First detection and complete genome of Soybean chlorotic mottle virus naturally infecting soybean in China by deep sequencing

作     者：HU Qian-qian LIU Xue-jian HAN Xue-dong LIU Yong JIANG Jun-xi XIE Yan 

作者机构：State Key Laboratory of Rice BiologyInstitute of BiotechnologyZhejiang UniversityHangzhou 310058P.R.China Hunan Plant Protection InstituteChangsha 410125P.R.China College of AgricultureJiangxi Agricultural UniversityNanchang 330000P.R.China 

出 版 物：《Journal of Integrative Agriculture》 (农业科学学报（英文版）)

年 卷 期：2019年第18卷第11期

页      面：2664-2667页

核心收录：

学科分类：0202[经济学-应用经济学] 02[经济学] 020205[经济学-产业经济学] 

基　　金：supported by the Special Fund for Agro-Scientific Research in the Public Interest, China (201303028) the National Natural Science Foundation of China (31571977) 

主　　题：Soybean chlorotic mottle virus Soymovirus genome sequence sequence analysis 

摘      要：Soybean chlorotic mottle virus(SbCMV)was first detected from soybean plants in Jiangxi Province of China by high throughput sequencing and was confirmed by *** complete nucleotide sequence of NC113 was determined to be 8210 nucleotides,and shared the highest similarity(91.7%)with sequences of SbCMV that was only reported in *** encodes nine putative open reading frames(ORFs Ia,Ib and Ⅱ-Ⅷ),and contains a large intergenic region located at nucleotide 5976-6512 between ORFs VI and *** analysis and phylogenetic tree indicated that NC113 is an isolate of SbCMV,and is more related to the soymoviruses Blueberry red ringspot virus(BRRSV),Peanut chlorotic streak virus(PCSV)and Cestrum yellow leaf curling virus(CmYLCV)than to other representative members in the Caulimoviridae *** survey of 472 legume plants from Jiangxi and Zhejiang provinces showed SbCMV was only detected from soybean in Nanchang City with a low incidence *** is the first report of Soybean chlorotic mottle virus identified in China.