Bioinformatic Analysis of BBTV Satellite DNA in Hainan
Bioinformatic Analysis of BBTV Satellite DNA in Hainan作者机构:Institute of Tropical Bioscience and Biotechnology CA TAS Haikou 571101 China
出 版 物:《Virologica Sinica》 (中国病毒学(英文版))
年 卷 期:2011年第26卷第4期
页 面:279-284页
核心收录:
学科分类:0831[工学-生物医学工程(可授工学、理学、医学学位)] 0711[理学-系统科学] 07[理学] 08[工学] 09[农学] 0904[农学-植物保护] 090401[农学-植物病理学]
基 金:The Central Level Scientific Research Institutes for Basic R & D Special Fund Business(ITBB110303)
主 题:Banana bunchy top virus Satellite Prediction
摘 要:Banana bunchy top virus (BBTV),family Nanaviridae,genus Babuvirus,is a single stranded DNA virus (ssDNA) that causes banana bunchy top disease (BBTD) in banana *** is the most common and most destructive of all viruses in these plants and is widespread throughout the Asia-Pacific *** this study we isolated,cloned and sequenced a BBTV sample from Hainan Island,*** results from sequencing and bioinformatics analysis indicate this isolate represents a satellite DNA component with 12 DNA sequences *** also predicted the physical and chemical properties,structure,signal peptide,phosphorylation,secondary structure,tertiary structure and functional domains of its encoding protein,and compare them with the corresponding quantities in the replication initiation protein of BBTV DNA1.