THE QSAR RESEARCH ON AURONE INHIBITORS OF HEPATITIS C VIRUS RNA-DEPENDENT RNA POLYMERASE BY APPLYING MULTI-DIMENSIONAL SCALING METHOD
THE QSAR RESEARCH ON AURONE INHIBITORS OF HEPATITIS C VIRUS RNA-DEPENDENT RNA POLYMERASE BY APPLYING MULTI-DIMENSIONAL SCALING METHOD作者机构:School of StatisticsCentral University of Financial and Economics Beijing 100081 P. R. China Supercomputing CenterComputer Network Information Center Chinese Academy of Sciences Beijing 100190 P. R. China
出 版 物:《International Journal of Biomathematics》 (生物数学学报(英文版))
年 卷 期:2013年第6卷第1期
页 面:23-39页
核心收录:
学科分类:0710[理学-生物学] 1007[医学-药学(可授医学、理学学位)] 100705[医学-微生物与生化药学] 07[理学] 071007[理学-遗传学] 0701[理学-数学] 0812[工学-计算机科学与技术(可授工学、理学学位)] 10[医学]
基 金:Foundation of Academic Discipline Program Ministry of Science and Technology of the People's Republic of China, MOST, (2009AA01A130) Central University of Finance and Economics, CUFE
主 题:HCV inhibitor structure-activity relationship MDS method PROXSCAL algorithm.
摘 要:In this paper, we take naturally occurring 2-benzylidenebenzofuran-3-ones (aurones) inhibitors of hepatitis C virus (HCV) RNA-dependent RNA polymerase (RdRp) as an example to study the Multi-dimensional scaling (MDS) method for structure-activity relationship. By analyzing training set molecules, our MDS method combined with a PROXSCAL algorithm can predict inhibitory activity of most compounds correctly. Thus, a new sample's activity can be estimated and judged conveniently, and whether it should be synthesized can be known. The MDS method is applicable to optimize the structure for a compound and to provide suggestions for drug design.