Plant pan-genomics and its applications
作者机构：State Key Laboratory of BiocontrolSchool of AgricultureSun Yat-sen UniversityShenzhen 518107China State Key Laboratory of Plant Cell and Chromosome EngineeringInstitute of Genetics and Developmental BiologyInnovation Academy for Seed DesignChinese Academy of SciencesBeijing 100101China State Key Laboratory of Plant Physiology and Biochemistry and National Maize Improvement CenterDepartment of Plant Genetics and BreedingChina Agricultural UniversityBeijing 100193China Shanghai Key Laboratory of Plant Molecular SciencesCollege of Life SciencesShanghai Normal UniversityShanghai 200234China
出 版 物：《Molecular Plant》 (分子植物（英文版）)
年 卷 期：2023年第16卷第1期
页 面：168-186页
核心收录：
学科分类：0710[理学-生物学] 071001[理学-植物学] 07[理学] 0901[农学-作物学] 0902[农学-园艺学]
基 金：National Natural Science Foundation of China(31825015 to X.H 31901596 to J.S.) Young Elite Scientists Sponsorship Program by CAST(2021QNRC001 toJ.S.)
主 题：plant pan-genome genome assembly structural variations graph genome T-2-T genome
摘 要：Plant genomes are so highly diverse that a substantial proportion of genomic sequences are not shared among *** variable DNA sequences,along with the conserved core sequences,compose the more sophisticated pan-genome that represents the collection of all non-redundant DNA in a *** rapid progress in genome sequencing technologies,pan-genome research in plants is now *** we review recent advances in plant pan-genomics,including major driving forces of structural variations that constitute the variable sequences,methodological innovations for representing the pan-genome,and major successes in constructing plant *** also summarize recent efforts toward decoding the remaining dark matter in telomere-to-telomere or gapless plant *** new genome resources,which have remarkable advantages over numerous previously assembled less-than-perfect genomes,are expected to become new references for genetic studies and plant breeding.
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