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Efficiency of DNA barcodes for species delimitation:A case in Pterygiella Oliv.(Orobanchaceae)

Efficiency of DNA barcodes for species delimitation:A case in Pterygiella Oliv.(Orobanchaceae)

作     者:Alexandra H.WORTLEY 

作者机构:Royal Botanic Garden Edinburgh 

出 版 物:《Journal of Systematics and Evolution》 (植物分类学报(英文版))

年 卷 期:2011年第49卷第3期

页      面:189-202页

核心收录:

学科分类:0710[理学-生物学] 071001[理学-植物学] 07[理学] 

基  金:supported by the National Natural Science Foundation of China(Grant No.30970201) the Research Fund for the Large-scale Scientific Facilities of CAS(Grant No.2009-LSF-GBOWS-01) 

主  题:compensatory base changes(CBCs) DNA barcode ITS-2 non-monophyletic species Pterygiella Oliv. secondary structure. 

摘      要:DNA barcoding is becoming an increasingly popular means to identify *** obscure discrimination in the genus Pterygiella calls into question the re-assessment of the criterion for species *** collected 20 individuals,representing all five described species of this genus in its distributional *** aim was to use three proposed barcode DNA regions(rbcL,matK,and ITS) to diagnose Pterygiella species,and examine which barcode is more suitable for discerning the congeneric and related *** results showed that the core barcodes matK and rbcL were comparatively less ***,the ITS region,especially ITS-1 and ITS-2,successfully identified all species in the ***,the secondary structure of ITS-2 RNA,especially compensatory base changes,appears complementary to classical primary sequence analysis for DNA barcoding.

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